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Draft Genome of Halomonas lionensis RHS90 T , a Stress-Tolerant Gammaproteobacterium Isolated from Mediterranean Sea Sediments

Frédéric Gaboyer , Loïs Maignien , Mohamed Jebbar , Karine Alain
Genome Announcements, 2017, 5 (23), ⟨10.1128/genomeA.00311-17⟩
Article dans une revue hal-01618234v1

Draft Genome Sequence of Phaeobacter leonis Type Strain 306, an Alphaproteobacterium Isolated from Mediterranean Sea Sediments

Frédéric Gaboyer , Loïs Maignien , Mohamed Jebbar , Karine Alain
Genome Announcements, 2017, 5 (26), ⟨10.1128/genomeA.00312-17⟩
Article dans une revue hal-01618235v1
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Thermococcus henrietii sp. nov., a novel extreme thermophilic and piezophilic sulfur-reducing archaeon isolated from a deep-sea hydrothermal chimney

Karine Alain , Erwann Vince , Damien Courtine , Lois Maignien , Xiang Zeng , et al.
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (7), pp.004895. ⟨10.1099/ijsem.0.004895⟩
Article dans une revue hal-03322684v1
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Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities.

Loïs Maignien , Emelia A Deforce , Meghan E Chafee , a Murat Eren , Sheri L Simmons
mBio, 2014, 5 (1), pp.e00682-13. ⟨10.1128/mBio.00682-13⟩
Article dans une revue hal-01019120v1
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Thermococcus camini sp. nov., a hyperthermophilic and piezophilic archaeon isolated from a deep-sea hydrothermal vent at the Mid-Atlantic Ridge

Damien Courtine , Erwann Vince , Loïs Maignien , Xavier Philippon , Nicolas Gayet , et al.
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (7), ⟨10.1099/ijsem.0.004853⟩
Article dans une revue hal-03367146v1

Anammox bacteria drive fixed nitrogen loss in hadal trench sediments

Bo Thamdrup , Clemens Schauberger , Morten Larsen , Blandine Trouche , Lois Maignien , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (46), pp.e2104529118. ⟨10.1073/pnas.2104529118⟩
Article dans une revue hal-03589734v1

“The Legacy of Pyrococcus abyssi : from 1 to 100 Thermococcales genomes”

Violette Da Cunha , Catherine Badel , Philippe Oger , Loïs Maignien , Ghislaine Magdelenat , et al.
“Pyrococcus abyssi 20 years”, Journée Thématique, Violette Da Cunha, Patrick Forterre, Sep 2023, Évry-Courcouronnes, France
Communication dans un congrès hal-04330663v1
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Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area

Clarisse Lemonnier , Morgan Perennou , Damien Eveillard , Antonio Fernandez-Guerra , Aude Leynaert , et al.
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00376⟩
Article dans une revue hal-03083042v1
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Metagenome-assembled genomes of deep-sea sediments: changes in microbial functional potential lag behind redox transitions

Clemens Schauberger , Bo Thamdrup , Clarisse Lemonnier , Blandine Trouche , Julie Poulain , et al.
ISME Communications, 2024, 4 (1), pp.ycad005. ⟨10.1093/ismeco/ycad005⟩
Article dans une revue hal-04492228v1
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An assessment of environmental metabarcoding protocols aiming at favoring contemporary biodiversity in inventories of deep-sea communities

Miriam Brandt , Blandine Trouche , Nicolas Henry , Cathy Liautard-Haag , Lois Maignien , et al.
Frontiers in Marine Science, 2020, 7, pp.234. ⟨10.3389/fmars.2020.00234⟩
Article dans une revue hal-03410860v1
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Microbial community structure in hadal sediments: high similarity along trench axes and strong changes along redox gradients.

Clemens Schauberger , Ronnie N. Glud , Bela Hausmann , Blandine Trouche , Lois Maignien , et al.
The International Society of Microbiologial Ecology Journal, In press, ⟨10.1038/s41396-021-01021-w⟩
Article dans une revue hal-03415694v1
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Diversity and biogeography of bathyal and abyssal seafloor bacteria and archaea along a Mediterranean-Atlantic gradient

Blandine Trouche , Miriam Brandt , Caroline Belser , Covadonga Orejas , Stephane Pesant , et al.
Frontiers in Microbiology, 2021, 12, pp.702016. ⟨10.3389/fmicb.2021.702016⟩
Article dans une revue hal-03589735v1
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Microplastic bacterial communities in the Bay of Brest: Influence of polymer type and size

Laura Frère , Loïs Maignien , Morgane Chalopin , Arnaud Huvet , Emmanuel Rinnert , et al.
Environmental Pollution, 2018, 242, pp.614-625. ⟨10.1016/j.envpol.2018.07.023⟩
Article dans une revue hal-02130207v1

“The Legacy of Pyrococcus abyssi : from 1 to 100 Thermococcales genomes”

Violette Da Cunha , Catherine Badel , P. Oger , Loïs Maignien , Ghislaine Magdelenat , et al.
The 20th MicroScope anniversary, Alexandra CALTEAU, Aurélie LAJUS, David ROCHE, David VALLENET, Sep 2023, Évry-Courcouronnes, France
Communication dans un congrès hal-04360030v1

Redefining the archaea Thermococcales order with the biogeographic repartition and comparative genomic analysis of more than 100 isolates.

Violette Da Cunha , Philippe Oger , Damien Courtine , Loïs Maignien , Mohamed Jebbar , et al.
2022 International Workshop on Deep-Sea Microbiology,, Mohamed Jebbar, Sep 2022, Plouzane, France
Communication dans un congrès hal-04358652v1

Distribution and genomic variation of ammonia-oxidizing archaea in abyssal and hadal surface sediments

Blandine Trouche , Clemens Schauberger , Feriel Bouderka , Jean-Christophe Auguet , Caroline Belser , et al.
ISME Communications, 2023, 3 (1), pp.133. ⟨10.1038/s43705-023-00341-6⟩
Article dans une revue hal-04388214v1
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The mosquito microbiome includes habitat-specific but rare symbionts

Hans Schrieke , Loïs Maignien , Florentin Constancias , Florian Trigodet , Sarah Chakloute , et al.
Computational and Structural Biotechnology Journal, 2022, 20, pp.410-420. ⟨10.1016/j.csbj.2021.12.019⟩
Article dans une revue hal-03624763v1

Community-led, integrated, reproducible multi-omics with anvi'o

A. Murat Eren , Evan Kiefl , Alon Shaiber , Iva Veseli , Samuel E. Miller , et al.
Nature Microbiology, 2021, 6 (1), pp.3-6. ⟨10.1038/s41564-020-00834-3⟩
Article dans une revue cea-04284764v1