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Evolutionary success of prokaryotes

 J.C. Bertrand , P. Bonin , Bernard Ollivier , K. Alain , A. Godfroy , et al.
Bertrand, J.C. (ed.); Normand, P. (ed.); Ollivier, Bernard (ed.); Sime-Ngando, T. (ed.). Prokaryotes and evolution, Springer, pp.131-240, 2018, 978-3-319-99782-7. ⟨10.1007/978-3-319-99784-1_4⟩
Chapitre d'ouvrage hal-02328653v1
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Nematode diversity patterns in mangroves: a review of environmental drivers at different spatial scales

 Adriana Spedicato , Daniela Zeppilli , Gérard Thouzeau , Emma Michaud
Biodiversity and Conservation, 2023, 32 (5), pp.1451-1471. ⟨10.1007/s10531-023-02562-6⟩
Article dans une revue hal-04021343v1
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Metagenomes of the picoalga Bathycoccus from the Chile coastal upwelling.

 Daniel Vaulot , Cécile Lepère , Eve Toulza , Rodrigo de La Iglesia , Julie Poulain , et al.
PLoS ONE, 2012, 7 (6), pp.e39648. ⟨10.1371/journal.pone.0039648⟩
Article dans une revue hal-00848707v1

Continuous enrichment culture and molecular monitoring to investigate the microbial diversity of thermophiles inhabiting deep-sea hydrothermal ecosystems.

 Anne Postec , Laurent Urios , Françoise Lesongeur , Bernard Ollivier , Joël Querellou , et al.
Current Microbiology, 2005, 50 (3), pp.138-44. ⟨10.1007/s00284-004-4443-z⟩
Article dans une revue hal-00749036v1

Characterization of Vallitalea guaymasensis gen. nov., sp. nov., a novel marine bacterium, isolated from sediments of Guaymas basin

 R Lakhal , Nathalie Pradel , Anne Postec , M Hamdi , Bernard Ollivier , et al.
International Journal of Systematic and Evolutionary Microbiology, 2013, pp.doi:10.1099/ijs.0.045708-0
Article dans une revue hal-00787559v1

Mangrove meiofauna as bio-indicator for the monitoring of coastal and transitional waters in French Guiana (South America).

 Claire Michelet , Daniella Zeppilli , Cédric Hubas , Elisa Baldirighi , Emma Michaud
SeventIMCO, the 17th International Meiofauna Conference: Meiofauna in a changing world, Jul 2019, Evora, Portugal
Poster de conférence hal-03096771v1
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The Congolobe project, a multidisciplinary study of Congo deep-sea fan lobe complex: Overview of methods, strategies, observations and sampling

 C. Rabouille , K. Olu , François Baudin , A. Khripounoff , B. Dennielou , et al.
Deep Sea Research Part II: Topical Studies in Oceanography, 2017, 142, pp.7-24. ⟨10.1016/j.dsr2.2016.05.006⟩
Article dans une revue hal-01319092v1
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Genetic Potential of Dissulfurimicrobium hydrothermale, an Obligate Sulfur-Disproportionating Thermophilic Microorganism

 Stéven Yvenou , Maxime Allioux , Alexander Slobodkin , Galina Slobodkina , Mohamed Jebbar , et al.
Microorganisms, 2021, 10, ⟨10.3390/microorganisms10010060⟩
Article dans une revue hal-03504518v1
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Genome analysis of Thermosulfuriphilus ammonigenes ST65T, an anaerobic thermophilic chemolithoautotrophic bacterium isolated from a deep-sea hydrothermal vent

 Galina Slobodkina , Maxime Allioux , Alexander Merkel , Karine Alain , Mohamed Jebbar , et al.
Marine Genomics, 2020, pp.100786. ⟨10.1016/j.margen.2020.100786⟩
Article dans une revue hal-02995863v1
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Identification of enriched hyperthermophilic microbial communities from a deep-sea hydrothermal vent chimney under electrolithoautotrophic culture conditions

 Guillaume Pillot , Oulfat Amin Ali , Sylvain Davidson , Laetitia Shintu , Anne Godfroy , et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-94135-2⟩
Article dans une revue hal-03427430v1
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Diversity and biogeography of bathyal and abyssal seafloor bacteria and archaea along a Mediterranean-Atlantic gradient

 Blandine Trouche , Miriam Brandt , Caroline Belser , Covadonga Orejas , Stephane Pesant , et al.
Frontiers in Microbiology, 2021, 12, pp.702016. ⟨10.3389/fmicb.2021.702016⟩
Article dans une revue hal-03589735v1
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The Wolbachia mobilome in Culex pipiens includes a putative plasmid

 Julie Reveillaud , Sarah Bordenstein , Corinne Cruaud , Alon Shaiber , Mylène Weill , et al.
Nature Communications, 2019, 10 (1), pp.1051. ⟨10.1038/s41467-019-08973-w⟩
Article dans une revue hal-02114312v1
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Subseafloor archaeal communities: from the surface to a deep hot biosphere ?

 Erwan Roussel
Biodiversity and Ecology. Université de Bretagne Occidentale, 2008. English. ⟨NNT : ⟩
Thèse tel-01144691v1
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Complete Genome Sequence of the Silicimonas algicola Type Strain, a Representative of the Marine Roseobacter Group Isolated from the Cell Surface of the Marine Diatom Thalassiosira delicatula

 Klervi Crenn , Boyke Bunk , Cathrin Spröer , Jörg Overmann , Christian Jeanthon
Microbiology Resource Announcements, 2019, 8 (9), ⟨10.1128/MRA.00108-19⟩
Article dans une revue hal-02130564v1
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Comparative study of vent and seep macrofaunal communities in the Guaymas Basin

 M. Portail , K. Olu , E. Escobar-Briones , J. C. Caprais , L. Menot , et al.
Biogeosciences, 2015, 12 (18), pp.5455-5479. ⟨10.5194/bg-12-5455-2015⟩
Article dans une revue hal-02559412v1
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Microorganisms persist at record depths in the subseafloor of the Canterbury Basin.

 Maria-Cristina Ciobanu , Gaëtan Burgaud , Alexis Dufresne , Anja Breuker , Vanessa Rédou , et al.
The International Society of Microbiologial Ecology Journal, 2014, 8, pp.1370-80. ⟨10.1038/ismej.2013.250⟩
Article dans une revue hal-01056621v1
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Physiological and Genomic Characterization of a Hyperthermophilic Archaeon Archaeoglobus neptunius sp. nov. Isolated From a Deep-Sea Hydrothermal Vent Warrants the Reclassification of the Genus Archaeoglobus

 Galina Slobodkina , Maxime Allioux , Alexander Merkel , Marie-Anne Cambon-Bonavita , Karine Alain , et al.
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.679245⟩
Article dans une revue hal-03322688v1
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Acidisoma silvae sp. nov. and Acidisoma cellulosilytica sp. nov., Two Acidophilic Bacteria Isolated from Decaying Wood, Hydrolyzing Cellulose and Producing Poly-3-hydroxybutyrate

 Sophie Mieszkin , Eva Pouder , Stéphane Uroz , Christelle Simon-Colin , Karine Alain
Microorganisms, 2021, 9 (10), pp.2053. ⟨10.3390/microorganisms9102053⟩
Article dans une revue hal-03357174v1
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Investigation of bacterial communities within the digestive organs of the hydrothermal vent shrimp Rimicaris exoculata provide insights into holobiont geographic clustering

 Dominique A. Cowart , Lucile Durand , Marie-Anne Cambon-Bonavita , Sophie Arnaud-Haond
PLoS ONE, 2017, 12 (3), pp.e0172543. ⟨10.1371/journal.pone.0172543⟩
Article dans une revue hal-01927192v1
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Genomic Insights into the Carbon and Energy Metabolism of a Thermophilic Deep-Sea Bacterium Deferribacter autotrophicus Revealed New Metabolic Traits in the Phylum Deferribacteres

 Alexander Slobodkin , Galina Slobodkina , Maxime Allioux , Karine Alain , Mohamed Jebbar , et al.
Genes, 2019, 10 (11), pp.849. ⟨10.3390/genes10110849⟩
Article dans une revue hal-02359529v1
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Complete genome sequence of Methanofervidicoccus sp. A16, a thermophilic methanogen isolated from Mid Cayman Rise hydrothermal vent

 Liping Wang , Qiliang Lai , Mohamed Jebbar , Zongze Shao , Karine Alain
Marine Genomics, 2020, 53, pp.100768. ⟨10.1016/j.margen.2020.100768⟩
Article dans une revue hal-02995883v1
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A metagenomic insight into the microbiomes of geothermal springs in the Subantarctic Kerguelen Islands

 Maxime Allioux , Stéven Yvenou , Alexander Merkel , Marc Cozannet , Johanne Aubé , et al.
Scientific Reports, 2022, 12, ⟨10.1038/s41598-022-26299-4⟩
Article dans une revue hal-03912182v1

Biogeographical distribution of Rimicaris exoculata resident gut epibiont communities along the Mid-Atlantic Ridge hydrothermal vent sites

 Lucile Durand , Marie Roumagnac , Valérie Cueff-Gauchard , Cyrielle Jan , Mathieu Guri , et al.
FEMS Microbiology Ecology, 2015, 91 (10), ⟨10.1093/femsec/fiv101⟩
Article dans une revue hal-01922089v1
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Multiscale spatial patterns and environmental drivers of seamount and island slope megafaunal assemblages along the Mozambique channel

 Mélissa Hanafi-Portier , Sarah Samadi , Laure Corbari , Marion Boulard , Elda Miramontes , et al.
Deep Sea Research Part I: Oceanographic Research Papers, 2023, pp.104198. ⟨10.1016/j.dsr.2023.104198⟩
Article dans une revue hal-04337064v1
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A step towards measuring connectivity in the deep sea: elemental fingerprints of mollusk larval shells discriminate hydrothermal vent sites

 Vincent Mouchi , Christophe Pécheyran , Fanny Claverie , Cécile Cathalot , Marjolaine Matabos , et al.
Biogeosciences, 2024, 21 (1), pp.145-160. ⟨10.5194/bg-21-145-2024⟩
Article dans une revue hal-04494834v1

OBITools: a Unix-inspired software package for DNA metabarcoding

 Frédéric Boyer , Céline Mercier , Aurélie Bonin , Yvan Le Bras , Pierre Taberlet , et al.
Molecular Ecology Resources, 2015, pp.10.1111/1755-0998.12428. ⟨10.1111/1755-0998.12428⟩
Article dans une revue istex hal-01183582v1

Redefining the archaea Thermococcales order with the biogeographic repartition and comparative genomic analysis of more than 100 isolates.

 Violette Da Cunha , Philippe Oger , Damien Courtine , Loïs Maignien , Mohamed Jebbar , et al.
2022 International Workshop on Deep-Sea Microbiology,, Mohamed Jebbar, Sep 2022, Plouzane, France
Communication dans un congrès hal-04358652v1
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New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic Environments

 Marc Cozannet , Guillaume Borrel , Erwan Roussel , Yann Moalic , Maxime Allioux , et al.
Microorganisms, 2020, 9 (1), pp.30. ⟨10.3390/microorganisms9010030⟩
Article dans une revue hal-03124413v1
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Thermococcus camini sp. nov., a hyperthermophilic and piezophilic archaeon isolated from a deep-sea hydrothermal vent at the Mid-Atlantic Ridge

 Damien Courtine , Erwann Vince , Loïs Maignien , Xavier Philippon , Nicolas Gayet , et al.
International Journal of Systematic and Evolutionary Microbiology, 2021, 71 (7), ⟨10.1099/ijsem.0.004853⟩
Article dans une revue hal-03367146v1

Thermococcus atlanticus sp. nov., a hyperthermophilic Archaeon isolated from a deep-sea hydrothermal vent in the Mid-Atlantic Ridge

 Marie-Anne Cambon-Bonavita , Françoise Lesongeur , Patricia Pignet , Nathalie Wery , Christophe Lambert , et al.
Extremophiles, 2003, 7, pp.101-109. ⟨10.1007/s00792-002-0301-8⟩
Article dans une revue istex hal-01154267v1
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